Free Access
Issue
Environ. Biosafety Res.
Volume 6, Number 3, July-September 2007
Page(s) 207 - 218
DOI https://doi.org/10.1051/ebr:2007042
Published online 16 November 2007
  • Aaziz R, Tepfer M (1999a) Recombination in RNA viruses and in virus-resistent transgenic plants. J. Gen. Virol. 80: 1339–1346 [PubMed]
  • Aaziz R, Tepfer M (1999b) Recombination between genomic RNAs of two cucumoviruses under conditions of minimal selection pressure. Virology 263: 282–289 [CrossRef] [PubMed]
  • Audy P, Palukaitis P, Slack SA, Zaitlin M (1994) Replicase-mediated resistance to potato virus Y in transgenic tobacco plants. Mol. Plant-Microbe Interact. 7: 15–22 [CrossRef]
  • Beachy RN (1997) Mechanisms and applications of pathogen-derived resistance in transgenic plants. Curr. Opin. Biotechnol. 8: 215–220 [CrossRef] [PubMed]
  • Boonham N, Walsh K, Preston S, North J, Smith P, Barker I (2002) The detection of tuber necrotic isolates of Potato virus Y, and the accurate discrimination of PVY(O), PVY(N) and PVY(C) strains using RT-PCR. J. Virol. Methods 102: 103–112 [CrossRef] [PubMed]
  • Borja M, Rubio T, Scholthof HB, Jackson AO (1999) Restoration of wild-type virus by double recombination of tombusvirus mutants with a host transgene. Mol. Plant-Microbe Interact. 12: 153–162 [CrossRef] [PubMed]
  • Bousalem M, Dallot S, Fuji S, Natsuaki KT (2003) Origin, world-wide dispersion, bio-geographical diversification, radiation and recombination: an evolutionary history of Yam mild mosaic virus (YMMV). Infect. Genet. Evol. 3: 189–206 [CrossRef] [PubMed]
  • Bujarski JJ, Nagy PD (1996) Different mechanisms of homologous and nonhomologous recombination in Brome mosaic virus: role of RNA sequences and replicase proteins. Semin. Virol. 7: 363–372 [CrossRef]
  • Cervera MT, Riechmann JL, Martín MT, García JA (1993) Formula -Terminal sequence of Plum pox virus PS and o6 isolates: evidence for RNA recombination within the potyvirus group. J. Gen. Virol. 74: 329–334 [CrossRef] [PubMed]
  • de Wispelaere M, Gaubert S, Trouilloud S, Belin C, Tepfer M (2005) A map of the diversity of RNA3 recombinants appearing in plants infected with cucumber mosaic virus and tomato asperny virus. Virology 331: 117–127 [CrossRef] [PubMed]
  • Dietrich C, Maiss E (2002) Red fluorescent protein DsRed from Discosoma sp. as a reporter protein in higher plants. Biotechniques 32: 286–293 [PubMed]
  • Dietrich C, Maiss E (2003) Fluorescent labelling reveals spatial separation of potyvirus populations in mixed infected Nicotiana benthamiana plants. J. Gen. Virol. 84: 2871–2876 [CrossRef] [PubMed]
  • Domier LL, Franklin KM, Shahabuddin M, Hellmann GM, Overmeyer JH, Hiremath ST, Siaw MFE, Lomonossoff GP, Shaw JG, Rhoads RE (1986) The nucleotide sequence of Tobacco vein mottling virus RNA. Nucleic Acids Res. 14: 5417–5430 [CrossRef] [PubMed]
  • Fernandez-Cuartero B, Burgyan J, Aranda MA, Salanki K, Moriones E, Garcia-Arenal F (1994) Increase in the relative fitness of a plant virus RNA associated with its recombinant nature. Virology 203: 373–377 [CrossRef] [PubMed]
  • Fernandez-Delmond I, Pierrugues O, de Wispelaere M, Guilbaud L, Gaubert S, Diveki Z, Godon C, Tepfer M, Jacquemond M (2004) A novel strategy for creating recombinant infectious RNA virus genomes. J. Virol. Methods 121: 247–257 [CrossRef] [PubMed]
  • Gal-On A, Meiri E, Raccah B, Gaba V (1998) Recombination of engineered defective RNA species produces infective potyvirus in planta. J. Virol. 72: 5268–5270 [PubMed]
  • Gibbs MJ (1994) Risks in using transgenic plants? Science 264: 1650–1651 [CrossRef] [PubMed]
  • Glais L, Tribodet M, Kerlan C (2002) Genomic variability in Potato potyvirus Y (PVY): evidence that PVY(N)W and PVY(NTN) variants are single to multiple recombinants between PVY(O) and PVY(N) isolates. Arch. Virol. 147: 363–378 [CrossRef] [PubMed]
  • Glasa M, Palkovics L, Kominek P, Labonne G, Pittnerova S, Kudela O, Candresse T, Subr Z (2004) Geographically and temporally distant natural recombinant isolates of Plum pox virus (PPV) are genetically very similar and form a unique PPV subgroup. J. Gen. Virol. 85: 2671–2681 [CrossRef] [PubMed]
  • Glasa M, Marie-Jeann V, Moury B, Kúdela O, Quiot J-B (2002) Molecular variability of the P3-6K1 region among geographically and biologically distinct isolates of Plum pox virus. Arch. Virol. 147: 563–575 [CrossRef] [PubMed]
  • Greene AE, Allison RF (1994) Recombination between viral-RNA and transgenic plant transcripts. Science 263: 1423–1425 [CrossRef] [PubMed]
  • Greene AE, Allison RF (1996) Deletions in the 3' untranslated region of cowpea chlorotic mottle virus transgene reduce recovery of recombinant viruses in transgenic plants. Virology 225: 231–234 [CrossRef] [PubMed]
  • Jridi C, Martin JF, Marie-Jeanne V, Labonne G, Blanc S (2006) Distinct viral populations differentiate and evolve independently in a single perennial host plant. J. Virol. 80: 2349–2357 [CrossRef] [PubMed]
  • Koenig R, Büttner G (2004) Strategies for the detection of potential Beet necrotic yellow vein virus genome recombinations which might arise as a result of growing A type coat protein gene-expressing sugarbeets in soil containing B type virus. Transgenic Res. 13: 21–28 [CrossRef] [PubMed]
  • Korte AM, Maiss E, Kramer I, Casper R (1995) Biosafety considerations of different Plum pox potyvirus (PPV) genes used for transformation of plants. Acta Hort. 368: 280–284
  • Krause-Sakate R, Fakhfakh H, Peypelut M, Pavan MA, Zerbini FM, Marrakchi M, Candresse T, Le Gall O (2004) A naturally occurring recombinant isolate of Lettuce mosaic virus. Arch. Virol. 149: 191–197 [PubMed]
  • Lawson C, Kaniewski W, Haley L, Rozman R, Newell C, Sanders P, Tumer NE (1990) Engineering resistance to mixed virus infection in a commercial potato cultivar: resistance to Potato virus X and Potato virus Y in transgenic Russet Burbank. Biotechnology 8: 127–134 [CrossRef]
  • López-Moya JJ, Fernández-Ferández MR, Cambra M, García JA (2000) Biotechnological aspects of Plum pox virus. J. Biotechnol. 76: 121–136 [CrossRef] [PubMed]
  • Maiss E, Timpe U, Brisske-Rode A, Lesemann D-E, Casper R (1992) Infectious in vivo transcripts of a Plum pox potyvirus full-length cDNA clone containing the Cauliflower mosaic virus 35S RNA promoter. J. Gen. Virol. 73: 709–713 [CrossRef] [PubMed]
  • Meier M, Truve E (2006) An attempt to identify recombinants between two sobemoviruses in doubly infected oat plants. Environ. Biosafety Res. 5: 47–56 [CrossRef] [EDP Sciences] [PubMed]
  • Menzel W, Jelkmann W, Maiss E (2002) Detection of four apple viruses by multiplex RT-PCR assays with coamplification of plant mRNA as internal control. J. Virol. Meth. 99: 81–92 [CrossRef]
  • Moonan F, Molina J, Mirkov TE (2000) Sugarcane yellow leaf virus: an emerging virus that has evolved by recombination between luteoviral and poleroviral ancestors. Virology 269: 156–171 [CrossRef] [PubMed]
  • Moreno IM, Malpica JM, Diaz-Pendon JA, Moriones E, Fraile A, García-Arenal F (2004) Variability and genetic structure of the population of Watermelon mosaic virus infecting melon in Spain. Virology 318: 451–60 [CrossRef] [PubMed]
  • Moreno M, Bernal JJ, Jimenez I, Rodriguez-Cerezo E (1998) Resistance in plants transformed with the P1 or P3 gene of Tobacco vein mottling potyvirus. J. Gen. Virol. 79: 2819–2827 [PubMed]
  • Palkovics L, Burgyan J, Balázs E (1993) Comparative sequence analysis of four complete primary structures of Plum pox virus strains. Virus Genes 7: 339–347 [CrossRef] [PubMed]
  • Powell-Abel P, Nelson RS, De B, Hoffmann N, Rogers SG, Fraley RT, Beachy RN (1986) Delay of disease development in transgenic plants that express the Tobacco mosaic virus coat protein gene. Science 232: 738–763 [CrossRef] [PubMed]
  • Revers F, Le Gall O, Candresse T, Le Romancer M, Dunez J (1996) Frequent occurrence of recombinant potyvirus isolates. J. Gen. Virol. 77: 1953–1965 [CrossRef] [PubMed]
  • Rubio T, Borja M, Scholthoff HB, Jackson AO (1999) Recombination with host transgenes and effect on virus evolution: an overview and opinion. Mol. Plant-Microbe Interact. 12: 87–92 [CrossRef]
  • Savenkov EI, Valkonen JPT (2001) Coat protein gene-mediated resistance to Potato virus A in transgenic plants is suppressed following infection with another potyvirus. J. Gen. Virol. 82: 2275–2278 [PubMed]
  • Shukla DD, Ward CW (1988) Amino acid sequence homology of coat protein as a basis for identification and classification of the potyvirus group. J. Gen. Virol. 69: 2703–2710 [CrossRef]
  • Slilaty SN, Lebel S (1998) Accurate insertional inactivation of lacZFormula : construction of pTrueBlue and M13TrueBlue cloning vectors. Gene 213: 83–91 [CrossRef] [PubMed]
  • Tan Z, Wada Y, Chen J, Ohshima K (2004) Inter- and intralineage recombinants are common in natural populations of Turnip mosaic virus. J. Gen. Virol. 85: 2683–2696 [CrossRef] [PubMed]
  • Tepfer M (2002) Risk assessment of virus-resistant transgenic plants. Annu. Rev. Phytopathol. 40: 467–491 [CrossRef] [PubMed]
  • Thole V, Dalmay T, Burgyan J, Balázs E (1993) Cloning and sequencing of potato virus Y (Hungarian isolate) genomic RNA. Gene 123: 149–156 [CrossRef] [PubMed]
  • Urcuqui-Inchima S, Haenni AL, Bernardi F (2001) Potyvirus proteins: a wealth of functions. Virus Res. 74: 157–175 [CrossRef] [PubMed]
  • Varrelmann M, Maiss E (2000) Mutations in the coat protein gene of Plum pox virus suppress particle assembly, heterologous encapsidation and complementation in plants of Nicotiana benthamiana. J. Gen. Virol. 81: 567–576 [PubMed]
  • Varrelmann M, Palkovics L, Maiss E (2000) Transgenic or plant expression vector-mediated recombination of Plum pox virus. J. Virol. 74: 7462–7469 [CrossRef] [PubMed]
  • Wintermantel WM, Schoelz JE (1996) Isolation of recombinant viruses between Cauliflower mosaic virus and a viral gene in transgenic plants under conditions of moderate selection pressure. Virology 223: 156–164 [CrossRef] [PubMed]