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Antimicrobial drug resistance mechanisms among Mollicutes
Olga A. Chernova, Vladislav M. Chernov, Alexey A. Mouzykantov, Natalya B. Baranova, Inna A. Edelstein and Rustam I. Aminov International Journal of Antimicrobial Agents 57(2) 106253 (2021) https://doi.org/10.1016/j.ijantimicag.2020.106253
Persistence of Xanthomonas campestris pv. campestris in Field Soil in Central Europe
Filip Gazdik, Samuel Magnus, Steven J. Roberts, Rafal Baranski, Jana Cechova, Robert Pokluda, Ales Eichmeier, Dariusz Grzebelus and Miroslav Baranek Microorganisms 9(3) 591 (2021) https://doi.org/10.3390/microorganisms9030591
Impact of common sample pre-treatments on key soil microbial properties
Julia Schroeder, Lisa Kammann, Mirjam Helfrich, Christoph C. Tebbe and Christopher Poeplau Soil Biology and Biochemistry 160 108321 (2021) https://doi.org/10.1016/j.soilbio.2021.108321
Antibiotic-Resistant Bacteria in Aquaculture and Climate Change: A Challenge for Health in the Mediterranean Area
Milva Pepi and Silvano Focardi International Journal of Environmental Research and Public Health 18(11) 5723 (2021) https://doi.org/10.3390/ijerph18115723
Living Lithic and Sublithic Bacterial Communities in Namibian Drylands
Rapid detection of viable Cronobacter sakazakii in powdered infant formula using improved propidium monoazide (PMAxx) and quantitative recombinase polymerase amplification (qRPA) assay
Targeting the Active Rhizosphere Microbiome of Trifolium pratense in Grassland Evidences a Stronger-Than-Expected Belowground Biodiversity-Ecosystem Functioning Link
Advanced molecular-based surveillance of quagga and zebra mussels: A review of environmental DNA/RNA (eDNA/eRNA) studies and considerations for future directions
The state, transport, and fate of aboveground terrestrial arthropod eDNA
Rafael E. Valentin, Kathleen E. Kyle, Michael C. Allen, Dustin J. Welbourne and Julie L. Lockwood Environmental DNA 3(6) 1081 (2021) https://doi.org/10.1002/edn3.229
Phospholipid fatty acid (PLFA) analysis as a tool to estimate absolute abundances from compositional 16S rRNA bacterial metabarcoding data
Natascha Lewe, Syrie Hermans, Gavin Lear, Laura T. Kelly, Georgia Thomson-Laing, Barbara Weisbrod, Susanna A. Wood, Robert A. Keyzers and Julie R. Deslippe Journal of Microbiological Methods 188 106271 (2021) https://doi.org/10.1016/j.mimet.2021.106271
Environmental dissolved DNA harbours meaningful biological information on microbial community structure
Borja Aldeguer‐Riquelme, María Dolores Ramos‐Barbero, Fernando Santos and Josefa Antón Environmental Microbiology 23(5) 2669 (2021) https://doi.org/10.1111/1462-2920.15510
Using the heat generated from electrically conductive concrete slabs to reduce antibiotic resistance in beef cattle manure
Occurrence of antibiotic resistant bacteria and resistance genes in agricultural irrigation waters from Valencia city (Spain)
Michela Amato, Diego Dasí, Ana González, María Antonia Ferrús and María Ángeles Castillo Agricultural Water Management 256 107097 (2021) https://doi.org/10.1016/j.agwat.2021.107097
Single-use microfluidic device for purification and concentration of environmental DNA from river water
Joana Carvalho, Lorena Diéguez, Andrey Ipatov, Joana Rafaela Guerreiro, Alejandro Garrido-Maestu, Sarah Azinheiro and Marta Prado Talanta 226 122109 (2021) https://doi.org/10.1016/j.talanta.2021.122109
Comparison of picoeukaryote community structures and their environmental relationships between summer and autumn in the southern Chukchi Sea
Quantitative Microbial Risk Assessment of Pediatric Infections Attributable to Ingestion of Fecally Contaminated Domestic Soils in Low-Income Urban Maputo, Mozambique
Drew Capone, Aaron Bivins, Jackie Knee, Oliver Cumming, Rassul Nalá and Joe Brown Environmental Science & Technology 55(3) 1941 (2021) https://doi.org/10.1021/acs.est.0c06972
The effect of crop species on DNase-producing bacteria in two soils
Fate of Environmental Proteins (eProteins) from Genetically Engineered Crops in Streams is Controlled by Water pH and Ecosystem Metabolism
Pedro F. P. Brandão-Dias, Emma J. Rosi, Arial J. Shogren, Jennifer L. Tank, David T. Fischer and Scott P. Egan Environmental Science & Technology 55(8) 4688 (2021) https://doi.org/10.1021/acs.est.0c05731
Complementary DNA sequencing (cDNA): an effective approach for assessing the diversity and distribution of marine benthic ciliates along hydrographic gradients
“Touch microbiome” as a potential tool for forensic investigation: A pilot study
Noemi Procopio, Flavia Lovisolo, Giulia Sguazzi, Stefano Ghignone, Samuele Voyron, Mario Migliario, Filippo Renò, Federica Sellitto, Gabriella D'Angiolella, Pamela Tozzo, Luciana Caenazzo and Sarah Gino Journal of Forensic and Legal Medicine 82 102223 (2021) https://doi.org/10.1016/j.jflm.2021.102223
Fate and persistence of antibiotic-resistant bacteria and genes through a multi-barrier treatment facility for direct potable reuse
Lina Wallmann, Jörg Krampe, Josef Lahnsteiner, Elena Radu, Pierre van Rensburg, Katarzyna Slipko, Markus Wögerbauer and Norbert Kreuzinger Journal of Water Reuse and Desalination 11(3) 373 (2021) https://doi.org/10.2166/wrd.2021.097
Application of wood ash leads to strong vertical gradients in soil pH changing prokaryotic community structure in forest top soil
Abalone Withering Syndrome Disease Dynamics: Infectious Dose and Temporal Stability in Seawater
Lisa M. Crosson, Nina S. Lottsfeldt, Mariah E. Weavil-Abueg and Carolyn S. Friedman Journal of Aquatic Animal Health 32(2) 83 (2020) https://doi.org/10.1002/aah.10102
Tailoring plant-associated microbial inoculants in agriculture: a roadmap for successful application
Maged M Saad, Abdul Aziz Eida, Heribert Hirt and Peter Doerner Journal of Experimental Botany 71(13) 3878 (2020) https://doi.org/10.1093/jxb/eraa111
Non-antibiotic pharmaceuticals enhance the transmission of exogenous antibiotic resistance genes through bacterial transformation
Yue Wang, Ji Lu, Jan Engelstädter, Shuai Zhang, Pengbo Ding, Likai Mao, Zhiguo Yuan, Philip L Bond and Jianhua Guo The ISME Journal 14(8) 2179 (2020) https://doi.org/10.1038/s41396-020-0679-2
From Sea Surface to Seafloor: A Benthic Allochthonous eDNA Survey for the Abyssal Ocean
Prevalence and seasonal dynamics of blaCTX-M antibiotic resistance genes and fecal indicator organisms in the lower Lahn River, Germany
Ilona Herrig, Susanne Fleischmann, Julia Regnery, Jessica Wesp, Georg Reifferscheid, Werner Manz and Axel Cloeckaert PLOS ONE 15(4) e0232289 (2020) https://doi.org/10.1371/journal.pone.0232289
Extracellular DNA (eDNA): Neglected and Potential Sources of Antibiotic Resistant Genes (ARGs) in the Aquatic Environments
Containment of a genetically modified microorganism by an activated sludge system
Andrea Nuzzo, Salvatore Puccio, Claudio Martina, Biancamaria Pietrangeli, Gonzalo A. Martinez, Lorenzo Bertin, Maurizio Mancini, Fabio Fava and Giulio Zanaroli New Biotechnology 55 58 (2020) https://doi.org/10.1016/j.nbt.2019.10.001
Rice Research for Quality Improvement: Genomics and Genetic Engineering
Qasim Ali, Rashida Parveen, Ayesha Anwar and Abdul Rehman Rice Research for Quality Improvement: Genomics and Genetic Engineering 179 (2020) https://doi.org/10.1007/978-981-15-5337-0_9
Effect of graphitic carbon nitride powders on adsorption removal of antibiotic resistance genes from water
Use of environmental DNA to detect the invasive aquatic plants Myriophyllum spicatum and Egeria densa in lakes
Lauren M. Kuehne, Carl O. Ostberg, Dorothy M. Chase, Jeffrey J. Duda and Julian D. Olden Freshwater Science 39(3) 521 (2020) https://doi.org/10.1086/710106
Membrane Fouling Inversely Impacts Intracellular and Extracellular Antibiotic Resistance Gene Abundances in the Effluent of an Anaerobic Membrane Bioreactor
Ali Zarei-Baygi, Phillip Wang, Moustapha Harb, Lauren B. Stadler and Adam L. Smith Environmental Science & Technology 54(19) 12742 (2020) https://doi.org/10.1021/acs.est.0c04787
Combined membrane filtration and 265 nm UV irradiation for effective removal of cell free antibiotic resistance genes from feed water and concentrate
Pawel Krzeminski, Edward Feys, Marc Anglès d'Auriac, Aina Charlotte Wennberg, Muhammad Umar, Carsten Ulrich Schwermer and Wolfgang Uhl Journal of Membrane Science 598 117676 (2020) https://doi.org/10.1016/j.memsci.2019.117676
Unrecognized Contributions of Dissolved Organic Matter Inducing Photodamages to the Decay of Extracellular DNA in Waters
Chlorination effects on DNA based characterization of water microbiomes and implications for the interpretation of data from disinfected systems
Kishor Acharya, Franella Francos Halla, Said Maneno Massawa, Shaaban Mrisho Mgana, Tom Komar, Russell J. Davenport and David Werner Journal of Environmental Management 276 111319 (2020) https://doi.org/10.1016/j.jenvman.2020.111319
The Role of DNA in the Extracellular Environment: A Focus on NETs, RETs and Biofilms
Organism migration in soils: Should we be so comfortable with diagnosing ancient infectious diseases?
Dennis F. Lawler, Basil P. Tangredi and Christopher C. Widga International Journal of Osteoarchaeology 30(3) 297 (2020) https://doi.org/10.1002/oa.2855
Anaerobic digestion reduces extracellular antibiotic resistance genes in waste activated sludge: The effects of temperature and degradation mechanisms
Estimating shedding and decay rates of environmental nuclear DNA with relation to water temperature and biomass
Toshiaki Jo, Mio Arimoto, Hiroaki Murakami, Reiji Masuda and Toshifumi Minamoto Environmental DNA 2(2) 140 (2020) https://doi.org/10.1002/edn3.51
Organic matter reduces the amount of detectable environmental DNA in freshwater
Kees van Bochove, Freek T. Bakker, Kevin K. Beentjes, Lia Hemerik, Rutger A. Vos and Barbara Gravendeel Ecology and Evolution 10(8) 3647 (2020) https://doi.org/10.1002/ece3.6123
Photosynthetic Picoeukaryotes Diversity in the Underlying Ice Waters of the White Sea, Russia
Tatiana A. Belevich, Ludmila V. Ilyash, Irina A. Milyutina, Maria D. Logacheva and Aleksey V. Troitsky Diversity 12(3) 93 (2020) https://doi.org/10.3390/d12030093
Cell-Free DNA: An Underestimated Source of Antibiotic Resistance Gene Dissemination at the Interface Between Human Activities and Downstream Environments in the Context of Wastewater Reuse
Detection of Viable and Total Bacterial Community in the Pit Mud of Chinese Strong-Flavor Liquor Using Propidium Monoazide Combined With Quantitative PCR and 16S rRNA Gene Sequencing
Organic complexation of U(VI) in reducing soils at a natural analogue site: Implications for uranium transport
Adam J. Fuller, Peter Leary, Neil D. Gray, Helena S. Davies, J. Frederick W. Mosselmans, Filipa Cox, Clare H. Robinson, Jon K. Pittman, Clare M. McCann, Michael Muir, Margaret C. Graham, Satoshi Utsunomiya, William R. Bower, Katherine Morris, Samuel Shaw, Pieter Bots, Francis R. Livens and Gareth T.W. Law Chemosphere 254 126859 (2020) https://doi.org/10.1016/j.chemosphere.2020.126859
Fecal contamination of storm sewers: Evaluating wastewater micropollutants, human-specific Bacteroides 16S rRNA, and mitochondrial DNA genetic markers as alternative indicators of sewer cross connections
Ethanol and sodium acetate as a preservation method to delay degradation of environmental DNA
Bridget A. Ladell, Liza R. Walleser, S. Grace McCalla, Richard A. Erickson and Jon J. Amberg Conservation Genetics Resources 11(1) 83 (2019) https://doi.org/10.1007/s12686-017-0955-2
Horizontal gene transfer and shifts in linked bacterial community composition are associated with maintenance of antibiotic resistance genes during food waste composting
Examining the behavior of crop‐derived antibiotic resistance genes in anaerobic sludge batch reactors under thermophilic conditions
Courtney M. Gardner, Savannah J. Volkoff and Claudia K. Gunsch Biotechnology and Bioengineering 116(11) 3063 (2019) https://doi.org/10.1002/bit.27134
Noémie Matthey, Sandrine Stutzmann, Candice Stoudmann, Nicolas Guex, Christian Iseli and Melanie Blokesch (2019) https://doi.org/10.1101/618009
Evaluation of microbial shifts caused by a silver nanomaterial: comparison of four test systems
Kerstin Hund-Rinke, Anna Hümmler, Ruben Schlinkert, Franziska Wege and Gabriele Broll Environmental Sciences Europe 31(1) (2019) https://doi.org/10.1186/s12302-019-0268-z
Effect of artificial barriers on the distribution of the invasive signal crayfish and Chinese mitten crab
Translational Application of Circulating DNA in Oncology: Review of the Last Decades Achievements
Natalia O. Tuaeva, Luca Falzone, Yuri B. Porozov, Alexander E. Nosyrev, Vladimir M. Trukhan, Leda Kovatsi, Demetrios A. Spandidos, Nikolaos Drakoulis, Alexandra Kalogeraki, Charalampos Mamoulakis, George Tzanakakis, Massimo Libra and Aristides Tsatsakis Cells 8(10) 1251 (2019) https://doi.org/10.3390/cells8101251
Assessment of Artificial and Natural Transport Mechanisms of Ice Nucleating Particles in an Alpine Ski Resort in Obergurgl, Austria
Detection of pine needle diseases caused by Dothistroma septosporum, Dothistroma pini and Lecanosticta acicola using different methodologies
Salome Schneider, Esther Jung, Valentin Queloz, Joana B. Meyer, Daniel Rigling and Piotr Łakomy Forest Pathology 49(2) (2019) https://doi.org/10.1111/efp.12495
Mita Eva Sengupta, Micaela Hellström, Henry Curtis Kariuki, Annette Olsen, Philip Francis Thomsen, Helena Mejer, Eske Willerslev, Mariam Mwanje, Henry Madsen, Thomas Krogsgaard Kristensen, Anna-Sofie Stensgaard and Birgitte Jyding Vennervald (2019) https://doi.org/10.1101/530592
Metal cation saturation on montmorillonites facilitates the adsorption of DNA via cation bridging
Removal of extracellular free DNA and antibiotic resistance genes from water and wastewater by membranes ranging from microfiltration to reverse osmosis
Katarzyna Slipko, Daniela Reif, Markus Wögerbauer, Peter Hufnagl, Jörg Krampe and Norbert Kreuzinger Water Research 164 114916 (2019) https://doi.org/10.1016/j.watres.2019.114916
Effect of water temperature and fish biomass on environmental DNA shedding, degradation, and size distribution
Toshiaki Jo, Hiroaki Murakami, Satoshi Yamamoto, Reiji Masuda and Toshifumi Minamoto Ecology and Evolution 9(3) 1135 (2019) https://doi.org/10.1002/ece3.4802
Molecular-Scale Investigations Reveal Noncovalent Bonding Underlying the Adsorption of Environmental DNA on Mica
The mycobiome of Australian tree hollows in relation to the Cryptococcus gattii and C. neoformans species complexes
Laura J. Schmertmann, Laszlo Irinyi, Richard Malik, Jeff R. Powell, Wieland Meyer and Mark B. Krockenberger Ecology and Evolution 9(17) 9684 (2019) https://doi.org/10.1002/ece3.5498
Factors associated with the composition and diversity of the cervical microbiota of reproductive-age Black South African women: a retrospective cross-sectional study
Harris Onywera, Anna-Lise Williamson, Zizipho Z.A. Mbulawa, David Coetzee and Tracy L. Meiring PeerJ 7 e7488 (2019) https://doi.org/10.7717/peerj.7488